Trends in Neurosciences
Volume 34, Issue 8, August 2011, Pages 401-410
Journal home page for Trends in Neurosciences

Review
Clarifying lysosomal storage diseases

https://doi.org/10.1016/j.tins.2011.05.006Get rights and content

Lysosomal storage diseases (LSDs) are a class of metabolic disorders caused by mutations in proteins critical for lysosomal function. Such proteins include lysosomal enzymes, lysosomal integral membrane proteins, and proteins involved in the post-translational modification and trafficking of lysosomal proteins. There are many recognized forms of LSDs and, although individually rare, their combined prevalence is estimated to be 1 in 8000 births. Over two-thirds of LSDs involve central nervous system (CNS) dysfunction (progressive cognitive and motor decline) and these symptoms are often the most debilitating. Although the genetic basis for these disorders is clear and the biochemistry of the proteins well understood, the cellular mechanisms by which deficiencies in these proteins disrupt neuronal viability remain ambiguous. In this review, we provide an overview of the widespread cellular perturbations occurring in LSDs, how they might be linked and interventions that may specifically or globally correct those defects.

Introduction

In all cells, including neurons, the primary degradative organelle is the lysosome (see Glossary). Lysosomes receive their ‘substrates’ through various pathways, including endocytosis, phagocytosis and autophagy. Substrates are degraded via a finely orchestrated network of membrane-bound lysosomal proteins, soluble lysosomal hydrolases, lysosomal related organelles and other cellular constituents. When lysosomal function is impaired, neuronal dysfunction and neurodegeneration can occur. Beginning with Gaucher disease during the mid-1960s, the genetic and biochemical basis for many lysosomal storage diseases (LSDs) has been unraveled, and most have central nervous system (CNS) involvement (Table 1 and Table S1 in the supplementary material online).

All LSDs are recessively inherited monogenic disorders, of which two are X-linked. Loss-of-function mutations in one of the more than 50 known soluble enzymes (Table 1), including proteases, lipases, sulfatases, or proteins important in their synthesis or trafficking, cause substrate accumulation and lysosomal storage. Although individuals with LSD can display early symptoms, many are clinically normal at birth. This suggests that lysosomal dysfunction per se does not impact significantly the complex events of early brain development (neural induction, establishment of axis, neuronal differentiation and migration, and synapse formation). Furthermore, in the case of many different LSDs, children typically meet early developmental milestones, signifying that lysosomal storage does not affect neuronal function and maturation at early developmental stages.

Defects in proteins involved in lysosome regulation or function induce the accumulation of undigested molecules that can subsequently alter many cellular processes. These include lysosomal pH regulation, synaptic release, endocytosis, vesicle maturation, autophagy, exocytosis and Ca2+ homeostasis 1, 2, 3, 4. Many of these phenotypes, some of which are discussed in detail below, can be markedly improved by substrate reduction therapy (SRT), or enzyme or gene replacement (Box 1). In animal models or in patient biopsies, efficacy can be monitored by concomitant resolution of storage material 5, 6. However, such treatments are not yet available or feasible for most LSDs. Thus, understanding how the affected cellular pathways interconnect and impact the viability of neural cells is critical for future therapeutic development. A recently described transcriptional network, which controls the expression of many proteins involved in these various pathways, provides an important clue to the extent of their inter-relatedness [7]. This important discovery gives a fresh opportunity to revisit how mutations in a single gene required for lysosomal function might impact secondary cellular functions beyond the lysosome.

Section snippets

Traffic jams and lysosomal storage

Lysosomal proteins traffic to the lysosome via distinct pathways, as described elegantly in recent reviews 8, 9 and highlighted in Figure 1. This schematic exemplifies the interplay between the endosome–lysosome system and illustrates how various autophagic pathways are reliant on a functional lysosome for proper processing. Moreover, it places into context how roadblocks at specific steps might broadly impact cell viability. Recent studies illustrate how deletion of cargo carriers, rather than

The importance of vesicular pH

Considering the role of PS1 in V-ATPase trafficking (Figure 2) [12], it is interesting to speculate that the altered lysosomal pH in some LSDs 17, 18 reflects global defects in trafficking. A recent genetic screen in yeast has demonstrated that mutations in proteins involved in MVB trafficking and vacuole fusion perturb vacuolar pH [19]. Surprisingly, this study showed that mutations in multiple proteins involved in trafficking to the lysosome resulted in decreased vacuolar pH. These changes

Autophagy

Autophagy is a ubiquitous cellular process by which cytoplasmic proteins and whole organelles, such as mitochondria, are sequestered for lysosomal degradation 32, 33 (Figure 1). Autophagy can be divided into macroautophagy (organelle or cytoplasm enclosed in a double membrane), microautophagy (cytoplasmic degradation following engulfment by the lysosome), and chaperone-mediated autophagy (CMA; targeting of proteins to the lysosome via chaperones). Here, we focus on macroautophagy as CMA has

Exocytosis

Lysosomal function is intimately linked to exocytosis, and multiple LSDs such as MLIV, NPC and sialidosis have been shown to have impaired exocytosis 49, 50, 51. Exocytosis is the removal of cellular cargo by fusion of vesicles with the plasma membrane (Figure 1). Synaptic vesicles and lysosomes both have exocytic activity. Activated exocytosis (e.g. neurotransmitter release) and constitutive exocytosis (e.g. of lysosomal contents) both result in secretion (e.g. of signaling molecules, such as

A CLEARly integrated network

The pathways outlined in Figure 1 are interdependent, supporting a coordinated network. A commonly reported observation in LSDs is that decreases in the activity of a disease-associated enzyme are concomitant with increases in other lysosomal enzymes, suggesting that gene expression required for their interdependence is similarly orchestrated. In a recent study, this theory was bioinformatically and experimentally validated [7]. Motif sequence analysis identified a 10-base pair sequence near

Concluding remarks

Strides in cell biology over the past 50 years have been critical in expanding the view of the lysosome from a degradative organelle to one intimately linked to multiple cellular processes. Genetic mutations in specific proteins, particularly those involved in cellular trafficking pathways, have been associated with many LSDs. Yet how these deficiencies induce cellular dysfunction and, in many cases, CNS deficits remains unsettled (Box 2). What the field requires is methods to assess vesicle,

Acknowledgments

Preparation of this review was supported by grants from the National Institutes of Health and the Roy J Carver Trust. Figures were illustrated by Mary Moye-Rowley.

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      Interestingly, it has led to the identification of a large group of protein substrates from different subcellular compartments that are not restricted to the ER, including cytosolic (PFKP, SQSTM1), nucleolar (PPME1), cytoskeletal (TUBB, MAP2), and lysosomal (CTSB, PLD3, and ACP2) proteins (Broncel et al., 2016; Kielkowski et al., 2020a). In particular, in the lysosome, there is only limited evidence on PTMs of luminal lysosomal proteins other than N-glycosylation amid numerous diseases associated with lysosomal proteins such as the lysosomal acid phosphatase ACP2 in lysosomal storage diseases (LSDs) or the 5′-3′ exonuclease PLD3 in Alzheimer's disease and autoinflammatory diseases (Cappel et al., 2021; Cruchaga et al., 2014; Gavin et al., 2021; Gonzalez et al., 2018; Marques and Saftig, 2019; Schultz et al., 2011; Stadlmann et al., 2017; Stoka et al., 2016). Therefore, the discovery of lysosomal protein PTMs might shed new light on the regulation of their function, localization, and protein-protein interactions and hence putatively uncover unknown pathophysiologic mechanisms.

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