TABLE 1

DNA amplification primers


Amplicon Coordinatesa

Primer Sequence (5′ to 3′)

Exon

PCR Conditionsb
Forward
Reverse
−10,443 to −10,003 CTTTTGGTTTTCCTGGTATG GGAGTCTGATCTTGGGAAT A
−10,078 to −9,573 TTCCAACATGACTCTGATAA GCACAGTGGATAAACCTG A
−9,647 to −9,413 AAATATAAACAACGGCTAACCT AGACCCCACTTTCCTCAT 1 B
−137 to +153 GAGACCCGCTACAGAAGAT AGTTGTTGAAACCCCACTT 2 C
+9,442 to +9,669 CACTGTTTGTACAGGAAC AGAGAAAATAGGTAGGAAAT 3 C
+17,224 to +17,521 ACAACTGCTAATCATATCTG CTATTTAATGGAACAGCC 4 C
+20,600 to +20,808 TCCTGTTAATTCTCTGTGTGAC CACCCAGTAACATCAGGAA 5 C
+22,651 to +22,935 AGCCGTGTTCACAGTGTCA TCTTCCTAAAAGCCCTTGG 6 C
+23,856 to +24,293 TGACAAGTCTCCTCCCTGTT TCACATGGCACACCAAA 7 B
+24,943 to +25,153 TGAGTAGCTGGTACTAGACGTG GGGTGCATTAAGTAGTTAACTTACC 8 B
+27,093 to +27,449 CCCCAATCTTCCTTTTATA AAATCAGAAAAATAGCCACA 9 B
+27,380 to +27,648 CCATCTCCCTTTGAAAGTT TCTAGCATTAGAAGTGGAGC 9 A
+27,595 to +27,928
CCATCTCCCTTTGAAAGTT
TCTAGCATTAGAAGTGGAGC
9
A
  • a Coordinates are based on assigning the “A” of the ATG translation initiation codon +1.

  • b A, denaturation at 94°C for 5 min followed by 30 cycles of denaturation at 92°C for 30 s, annealing at 50°C for 30 s, and elongation at 75°C for 90 s, and a final elongation at 75°C for 5 min; B, denaturation at 94°C for 5 min followed by 30 cycles of denaturation at 92°C for 30 s, annealing at 55°C for 30 s, and elongation at 75°C for 90 s, and a final elongation at 75°C for 5 min; C, denaturation at 94°C for 5 min followed by 30 cycles of denaturation at 92°C for 30 s, annealing and elongation at 55°C for 90 s, and a final elongation at 75°C for 5 min.