Primers and PCR conditions used for CYP1A2 genotyping
Single Nucleotide Polymorphism (SNP) | Primer Name | Sequence 5′→ 3′ | PCR Program | [Mg2+] | PCR Product Size | Restriction Enzyme | Incubation Temperature | Genotype Patterns |
---|---|---|---|---|---|---|---|---|
mM | bp | °C | ||||||
rs2069514 (−3860 G→A) | Forward 3, reverse 2 (Fw3Rv2) | GCTACACATGATCGAGCTATAC | (94°C 10 min) and 35× (94°C 30 s, 56°C 30 s, 72°C 1 min) | 2.0 | 568 | BslI | 55 | G/G:343-132-93 |
CAGGTCTCTTCACTGTAAAGTTA | A/A:475-93 | |||||||
rs762551 (−163 C→A) | Forward 1, reverse 1 (Fw1Rv1) | TGAGGCTCCTTTCCAGCTCTCA | (94°C 10 min) and 35× (94°C 30 s, 60°C 30 s, 72°C 1 min) | 2.5 | 265 | PspOMI | 37 | C/C:211-54 |
AGAAGCTCTGTGGCCGAGAAGG | A/A:265 |