User profiles for P Adams
Paul D. AdamsLawrence Berkeley Laboratory & University of California Berkeley Verified email at lbl.gov Cited by 121539 |
[HTML][HTML] Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix
…, LL Videau, CJ Williams, PD Adams - … Section D: Structural …, 2019 - scripts.iucr.org
Diffraction (X-ray, neutron and electron) and electron cryo-microscopy are powerful
methods to determine three-dimensional macromolecular structures, which are required to …
methods to determine three-dimensional macromolecular structures, which are required to …
[PDF][PDF] Cellular senescence: defining a path forward
Cellular senescence is a cell state implicated in various physiological processes and a wide
spectrum of age-related diseases. Recently, interest in therapeutically targeting senescence …
spectrum of age-related diseases. Recently, interest in therapeutically targeting senescence …
The Phenix software for automated determination of macromolecular structures
PD Adams, PV Afonine, G Bunkóczi, VB Chen… - Methods, 2011 - Elsevier
X-ray crystallography is a critical tool in the study of biological systems. It is able to provide
information that has been a prerequisite to understanding the fundamentals of life. It is also a …
information that has been a prerequisite to understanding the fundamentals of life. It is also a …
Accurate prediction of protein structures and interactions using a three-track neural network
… The ADAMs contain prodomain and metalloprotease domains; the fold of the … with
experimental data that suggest that the ADAM prodomain inhibits metalloprotease activity using a …
experimental data that suggest that the ADAM prodomain inhibits metalloprotease activity using a …
[HTML][HTML] PHENIX: a comprehensive Python-based system for macromolecular structure solution
PD Adams, PV Afonine, G Bunkóczi… - … Section D: Biological …, 2010 - scripts.iucr.org
Macromolecular X-ray crystallography is routinely applied to understand biological processes
at a molecular level. However, significant time and effort are still required to solve and …
at a molecular level. However, significant time and effort are still required to solve and …
[HTML][HTML] Towards automated crystallographic structure refinement with phenix. refine
… j, U local,i and U local,j are the corresponding isotropic ADPs and p and q are empirical
constants. By default, R, p and q are fixed at empirically derived values of 5.0 Å, 1.69 and 1.03, …
constants. By default, R, p and q are fixed at empirically derived values of 5.0 Å, 1.69 and 1.03, …
Crystallography & NMR system: A new software suite for macromolecular structure determination
A new software suite, called Crystallography & NMR System (CNS), has been developed for
macromolecular structure determination by X-ray crystallography or solution nuclear …
macromolecular structure determination by X-ray crystallography or solution nuclear …
Genetic meta-analysis of diagnosed Alzheimer's disease identifies new risk loci and implicates Aβ, tau, immunity and lipid processing
Risk for late-onset Alzheimer’s disease (LOAD), the most prevalent dementia, is partially
driven by genetics. To identify LOAD risk loci, we performed a large genome-wide association …
driven by genetics. To identify LOAD risk loci, we performed a large genome-wide association …
Autophagy mediates degradation of nuclear lamina
Macroautophagy (hereafter referred to as autophagy) is a catabolic membrane trafficking
process that degrades a variety of cellular constituents and is associated with human diseases …
process that degrades a variety of cellular constituents and is associated with human diseases …
[HTML][HTML] Phaser crystallographic software
… used here does not refer to the degeneracy in the coordinates of the first MR model to be
fixed in space groups with an undefined origin (eg the y coordinate in the standard setting of P2 …
fixed in space groups with an undefined origin (eg the y coordinate in the standard setting of P2 …