TABLE 1

Variants in promoter region of the MDR1 gene in Japanese (n = 94) and Caucasian (n = 96) subjects


Location

Position

Allele

Nucleotide Sequence

Allele Frequency

Genotype

Frequency
Japanese
Caucasian
Japanese
Caucasian
Promoter -1517aa Tb agggTttaa 0.920 1.000 T/T 0.840 1.000
(0.881-0.959)c T/C 0.160 0.000
C agggCttaa 0.080 0.000 C/C 0.000 0.000
(0.041-0.119)
-1459aa Gb gtgaGataa 0.750 1.000 G/G 0.553 1.000
(0.688-0.812) G/A 0.394 0.000
A gtgaAataa 0.250 0.000 A/A 0.053 0.000
(0.188-0.312)
-1423aa GAb cagaGAtcat 1.000 0.995 GA/GA 1.000 0.990
(0.985-1.005) GA/- 0.000 0.010
Deletion caga_tcat 0.000 0.005 -/- 0.000 0.000
(-0.027-0.015)
-1132aa CCATCb aagaCCATCctgg 0.963 1.000 CCATC/CCATC 0.926 1.000
(0.936-0.990) CCATC/- 0.074 0.000
Deletion aaga_ctgg 0.037 0.000 -/- 0.000 0.000
(0.01-0.064)
-1017aa Tb atggTgtga 0.920 0.984 T/T 0.840 0.969
(0.881-0.959) (0.966-1.002) T/C 0.160 0.031
C atggCgtga 0.08 0.016 C/C 0.000 0.000
(0.041-0.119) (-0.002-0.034)
-824aa Tb attaTggct 0.995 1.000 T/T 0.989 1.000
(0.985-1.005) T/C 0.011 0.000
C attaCggct 0.005 0.000 C/C 0.000 0.000
(-0.027-0.015)
-755aa Ab agtgAtttt 1.000 0.995 A/A 1.000 0.990
(0.985-1.005) A/G 0.000 0.010
G agtgGtttt 0.000 0.005 G/G 0.000 0.000
(-0.027-0.015)
-41aa Ab cccaAtgat 0.894 1.000 A/A 0.798 1.000
(0.850-0.938) A/G 0.191 0.000
G cccaGtgat 0.106 0.000 G/G 0.011 0.000
(0.062-0.150)
-1452 Cb gaagCctga 0.968 1.000 C/C 0.936 1.000
(0.943-0.993) C/G 0.064 0.000
G gaagGctga 0.032 0.000 G/G 0.000 0.000
(0.007-0.057)
Exon 1 -1292 Tb cgagTagcg 0.920 0.984 T/T 0.840 0.969
(0.881-0.959) (0.966-1.002) T/C 0.160 0.031
C cgagCagcg 0.080 0.016 C/C 0.000 0.000




(0.041-0.119)
(-0.002-0.034)



  • d Position is relative to the initiation site of translation, which is defined as +1.

  • a Position is relative to the initiation site of exon 1a, which is defined as +1a

  • b Reference sequence GenBank accession no. AC002457

  • c The 95% confidence intervals are given in parentheses