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Vol. 304, Issue 3, 1314-1322, March 2003
-D-Arabinofuranosylcytosine and Its Analogs by
Human Deoxycytidine Kinase
Department of Pharmacology and Toxicology, University of Alabama at Birmingham, Birmingham, Alabama (H.S.); and Southern Research Institute, Birmingham, Alabama (S.C.S., K.N.T., J.A.S., W.B.P.)
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Abstract |
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4'-thio-
-D-Arabinofuranosylcytosine (T-araC) exhibits
excellent in vivo antitumor activity against a variety of solid tumors despite its structural similarity to
-D-arabinofuranosylcytosine (araC), an agent which is
poorly active against solid tumors in vivo. It is of great interest to
elucidate why these compounds show a profound difference in antitumor
activity. Because deoxycytidine kinase (dCK) is the critical enzyme in
the activation of both compounds, here we report the differences in the
substrate characteristics with human dCK between these compounds. The
catalytic efficiency (Vmax/Km) of araC
was 100-fold higher than that of T-araC using either ATP or UTP as the
phosphate donor. However, Vmax values of
araC and T-araC were similar when UTP was the phosphate donor. Since
UTP is believed to be the true phosphate donor for dCK in intact cells,
these data indicated that the rates of phosphorylation of these two
compounds at high pharmacologically relevant concentrations would be
similar. This prediction was confirmed in intact cell experiments,
which supported the hypothesis that UTP is the physiological phosphate
donor for dCK phosphorylation in cells. The relative lack of importance
of phosphate donor to the phosphorylation of T-araC by dCK revealed
important insights into the activation of this compound in human cells
at pharmacological doses. These studies indicated that replacement of
the 4'-oxygen with sulfur significantly reduced the substrate activity
of nucleoside analogs with dCK and that the superior activity of T-araC
with respect to araC against solid tumors was not due to superior
activity with dCK.
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Introduction |
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T-araC
(Fig. 1) is the most promising antitumor
agent among the 4'-thionucleoside analogs that have been synthesized in
our drug development program (Tiwari et al., 2000a
). It exhibits
excellent in vivo antitumor activity against a variety of human solid
tumor xenografts, such as CAK-1 (renal), NCI-H23 (non-small cell lung), HCT-116 (colon), LOX (melanomas), PANC-1 (pancreas), and DU-145 (prostate) (Waud et al., 1999
; Tomkinson et al., 2002
). Because of
these results, it is being evaluated for effectiveness in clinical trials by OSI Pharmaceuticals Inc. (Melville, NY) as OSI-7836. T-araC is a structural analog of araC (Fig. 1), which is clinically used in the treatment for acute myelogenous leukemia and other hematological malignancies (Peters et al., 1987
; Stryckmans et al.,
1987
; Mastrianni et al., 1992
) but is poorly active against solid
tumors in vivo (Davis et al., 1974
; Cheng and Capizzi, 1982
). It is of
great interest to elucidate how the minor structural difference between
araC and T-araC (the 4'-oxygen atom in the arabinofuranosyl ring is
replaced by a sulfur atom; Fig. 1) results in the profound difference
in antitumor activity that is observed with these two agents.
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Our previous studies indicated that the basic mechanisms of action of
these two agents were similar. They were phosphorylated to their
respective triphosphates, which inhibited DNA replication. (Parker et
al., 2000
). Blajeski et al. (2002)
have shown that araCTP and T-araCTP
similarly inhibit DNA synthesis (i.e., they are both alternative
substrates for DNA polymerase
and
, which results in chain
termination). However, there were many quantitative differences in the
metabolism and activity between araC and T-araC: 1) T-araC was
phosphorylated to active metabolites at 1% the rate of araC; 2)
T-araCTP was 20-fold more potent as an inhibitor of DNA synthesis than
was araCTP; 3) the t1/2 of T-araCTP
was twice that of araCTP; 4) the catalytic efficiency of T-araC with
cytidine deaminase was 10% that of araC; and 5) araCMP was a better
substrate for dCMP deaminase than was T-araCMP. Although it is possible that some of these differences could contribute to the activity of
T-araC against solid tumors, it is still uncertain why T-araC is a
superior agent against solid tumors.
As part of a series of investigations to define the mechanism of action of T-araC, we initiated this study to determine the difference in the substrate characteristics between araC and T-araC with deoxycytidine kinase (dCK), the enzyme that mediates the rate-limiting step in the activation of both compounds. In addition, the substrate properties of dCyd, T-dCyd, and 5-substituted analogs of T-araC, such as F-T-araC, Cl-T-araC, Br-T-araC, and CH3-T-araC with dCK were also determined to obtain insight into the structure-activity relationship of 4'-thionucleoside analogs with regard to their utilization by dCK.
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Materials and Methods |
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Materials.
dCyd, araC, and araCMP were purchased from
Sigma-Aldrich (St. Louis, MO). T-dCyd, T-araC, F-T-araC,
Cl-T-araC, Br-T-araC, and CH3-T-araC were
chemically synthesized in our laboratories (Secrist et al., 1991
;
Tiwari et al., 2000a
,b
). T-araCMP was synthesized from T-araCTP using
phosphodiesterase I, which was obtained from Sigma-Aldrich (95% yield,
95% purity). Its structure and purity were confirmed by
1H NMR, 31P NMR, MS, and
HPLC. The structures of the other compounds were verified by MS and
NMR. [5-3H]T-dCyd and
[5-3H]T-araC (5.0 and 9.6 Ci/mmol,
respectively) were labeled with 3H at the
5-position by Moravek Biochemicals, Inc. (Brea, CA). [5-3H]dCyd (26.5 Ci/mmol) and
[5-3H]araC (26 Ci/mmol) were also purchased
from Moravek Biochemicals, Inc. Other compounds were of standard
analytical grade.
Cell Culture. Wild-type CEM cells (human leukemia cell line; American Type Culture Collection, Manassas, VA), dCK-deficient CEM cells, which were generously provided by Dr. Jan Balzarini (Rega Institute for Medical Research, Leuven, Belgium), and HCT-116 cells (human colon cancer cell line; National Cancer Institute tumor repository, Bethesda, MD) were grown in RPMI 1640 medium (Invitrogen, Carlsbad, CA) containing 10% fetal bovine serum (Atlanta Biologicals, Norcross, GA), 1 mg/ml sodium bicarbonate, 10 U/ml penicillin, 10 µg/ml streptomycin, and 50 µg/ml gentamycin. Cell numbers of wild-type and dCK-deficient CEM cells were determined with a Coulter counter, and the concentration of compound that resulted in inhibition of cell growth by 50% over a 72-h incubation period was determined (IC50).
Purification of Deoxycytidine Kinase.
dCK was partially
purified from both CEM and HCT-116 cells as described by Datta et al.
(1989)
with some modifications. Briefly, CEM or HCT-116 cell pellets
were homogenized in 3 to 5 volumes of 50 mM Tris (pH 7.5), 0.5 mM EDTA,
5 mM dithiothreitol, and 1 mM phenylmethylsulfonyl fluoride. The
suspension was centrifuged at 40,000 rpm for 1 h, and the
supernatant fluid was dialyzed against the homogenization buffer
containing 30% glycerol. The crude extract was applied onto a 1-ml
HiTrap Q Sepharose HP anion exchange column (Amersham
Biosciences, Inc., Piscataway, NJ) that had been equilibrated
with the homogenization buffer containing 5% glycerol (running
buffer), and the protein was eluted using a step gradient of 200, 250, 300, and 1000 mM KCl in the running buffer (5 ml each). dCK eluted with
the 250 mM KCl wash. Active fractions were pooled and dialyzed against
the running buffer. Glycerol sufficient to yield 30% (v/v) was added,
and the sample was stored at
85°C. This procedure removed 97% of
the cellular protein and resulted in an increase in specific activity
of approximately 10-fold. dThd kinase (Parker et al., 1995
), UMP/CMP
kinase, and nucleotide phosphatase activities were not detected in the
enzyme preparation. To measure UMP/CMP kinase activity,
[3H]dCyd and its phosphorylated metabolites
generated in dCK assay were separated from each other by chromatography
on a Partisil SAX column (Thermo Hypersil, Keystone Scientific
Operations, Bellefonte, PA). The column was washed with a 50-min linear
gradient from 5 (pH 2.8) to 750 mM
NH4H2PO4
(pH 3.7) buffer with a flow rate of 2 ml/min. One-minute fractions were
collected from the column and counted for radioactivity.
Deoxycytidine Kinase Assay.
In the assays with
radiolabeled nucleosides, the reaction was carried out as described by
Parker et al. (1999)
. Briefly, solutions containing 50 mM Tris (pH
8.0), phosphate donor (either ATP or UTP), 7.5 mM
MgCl2, 20 mM sodium fluoride, various
concentrations of radiolabeled nucleosides, and sufficient enzyme to
give a linear reaction were incubated at 37°C. The reactions were
terminated by putting 40 µl of each assay onto Whatman DE-81 anion
exchange filter discs (Whatman International Ltd., Maidstone, England). The radioactivity of each disc was determined after washing three times
with 1 mM ammonium formate solution and twice with 95% ethanol. With
nonradiolabeled nucleosides, the reaction was carried out in the same
way as above, except that the reaction was stopped by boiling at
100°C or by the addition of 0.5 mM HClO4
followed by neutralizing with 8 N KOH. The particulate matter was
removed by filtration or centrifugation, and the extract was applied to Nucleosil SB silica SAX column (Interchim, Montlucon, France) as
described by Aussenac et al. (2001)
with some modifications. The
samples were eluted with a 30-min linear gradient from 7 to 500 mM
KH2PO4 (pH 4.0) and
followed by 20 min of 500 mM
KH2PO4 (pH 4.0) at a flow
rate of 2 ml/min. When ATP was used as the phosphate donor in the
assays, the ATP was eluted with 20 min of 2 M KCl in place of 500 mM
KH2PO4. Nucleoside
monophosphates were detected by UV absorbance at 260 nm. dCK kinase
activity with nonradiolabeled compounds was also determined by
observing the disappearance of substrate from the reaction mixture. The reactions were carried out, and an acid-soluble extract was obtained as
described above. The extract was applied to Hypersil BDS reverse phase
column (Thermo Hypersil, Keystone Scientific Operations). The mobile
phase was 2.5% acetonitrile in a 25 mM
NH4H2PO4
buffer (pH 4.5) at a flow rate of 1 ml/min. The nucleosides were
detected by UV absorbance at 260 nm.
Nucleotide Phosphatase Assay. Phosphatase activity of araCMP or T-araCMP was assayed in solutions containing 50 mM Tris (pH 8.0), 7.5 mM MgCl2, 50 or 100 µM nucleoside monophosphate, and various concentrations of enzyme. After an 8-h incubation at 37°C, the reaction was stopped by acid extraction as described above. The extract was applied to the reverse-phase HPLC analysis as described above to observe the formation of nucleoside from respective monophosphate.
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Results |
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Substrate Characteristics of dCyd, T-dCyd, araC, and T-araC with
dCK Using ATP as the Phosphate Donor.
The substrate
characteristics of dCyd, T-dCyd, araC, and T-araC with dCK from CEM
cells using 5 mM ATP as the phosphate donor were determined (Table
1). T-dCyd had the lowest
Vmax value among the four compounds,
indicating that the 4'-sulfur atom made the reaction velocity lower.
AraC had a 20-fold greater Km value
than dCyd, indicating that the arabino configuration caused the lower affinity for the enzyme. T-araC had the highest
Km value among the four compounds and
a much lower Vmax value than dCyd,
indicating that the two substitutions of 4'-oxygen to 4'-sulfur and
deoxyribose to arabinofuranose caused both the affinity to the enzyme
and the reaction velocity to be much lower. The catalytic efficiency of
T-araC using ATP as the phosphate donor was 1% that of araC. Similar
results were obtained with dCK isolated from HCT-116 cells (data not
shown).
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Substrate Characteristics of dCyd, araC, and T-araC with dCK Using
UTP as the Phosphate Donor.
Since UTP is considered to be the
physiological phosphate donor for dCK phosphorylation (White and
Capizzi, 1991
; Shewach et al., 1992
; Hughes et al., 1997
), the
substrate characteristics of dCyd, araC, and T-araC with the dCK from
CEM cells using 5 mM UTP were also determined (Table 1). The change of
the phosphate donor from 5 mM ATP to 5 mM UTP decreased the
Km value of araC by 40-fold although
decreasing those of dCyd and T-araC by only 4-fold. The phosphate donor
substitution also resulted in a decrease in the
Vmax value of araC by 15-fold, whereas
there was only a moderate decrease in
Vmax for dCyd and almost no decrease
in Vmax for T-araC. Because the
intracellular concentration of UTP is known to be lower than that of
ATP (White and Capizzi, 1991
; Shewach et al., 1992
), the kinetic values
of araC and T-araC using 0.1 mM UTP were also determined (data not
shown). The results were similar to those obtained at 5 mM UTP, which
indicated that the kinetic parameters for araC and T-araC were
independent of UTP concentration. Even though the kinetic parameters of
araC were affected much more than those of T-araC by changing the
phosphate donor, the catalytic efficiency of araC was still 100-fold
greater than that of T-araC using UTP as the phosphate donor.
Metabolism of araC and T-araC at Micromolar Concentrations in
Intact Cells.
The theoretical rates of phosphorylation of araC and
T-araC were calculated at 0.1 and 100 µM using the kinetic parameters obtained with ATP or UTP (Table 2). The
kinetic parameters indicated that if ATP is the physiological phosphate
donor, then phosphorylation of araC would be much greater than T-araC
at both high and low concentrations. However, if UTP is the
physiological phosphate donor, then the phosphorylation of T-araC would
be similar to araC at high concentrations. The concentration is
important because peak plasma levels in mice treated with a therapeutic
dose of T-araC (100 mg/kg) are approximately 100 µM (Waud et al.,
1999
; Parker et al., 2000
). To confirm this prediction, the difference in the rates of phosphorylation of araC and T-araC at 0.1 and 100 µM
in intact CEM cells was determined (Fig.
2). The difference in metabolism of these
agents at 100 µM was only 2- to 3-fold, whereas the difference at 0.1 µM was approximately 60-fold. Similar results were obtained with
intact HCT-116 cells (data not shown). The differences in rates of
phosphorylation of araC and T-araC in intact cells at both high and low
concentrations were consistent with the differences in the theoretical
rate of phosphorylation using UTP as the phosphate donor. The
theoretical difference in the rate of phosphorylation of araC and
T-araC at 100 µM using ATP as the phosphate donor (33-fold) was more
than 10-fold greater than the results obtained in the intact cell
experiment (2- to 3-fold). Therefore, these results strongly supported
the idea that UTP is the physiological phosphate donor for dCK.
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Phosphatase Activities of araCMP or T-araCMP in Crude Extract from
CEM Cells.
In our previous work, there was a discrepancy between
the results obtained with purified dCK and CEM cell extract (Parker et
al., 2000
). Results with purified enzyme indicated that the catalytic
efficiency was similar for araC and T-araC, which indicated that
metabolism in CEM cells of the two compounds would be similar. However,
the difference in rate of phosphorylation of araC and T-araC at low
concentrations by crude extracts from CEM cells was 100-fold, which was
consistent with the kinetic data reported in the current work. A
possible explanation of the previous results was that T-araCMP was
degraded more quickly than araCMP in the crude CEM cell extracts. To
test this hypothesis, the difference in phosphatase activities in crude
extracts from CEM cells between araCMP and T-araCMP was examined (data
not shown). At either 50 or 100 µM, the phosphatase activity of
araCMP was 2-fold higher than that of T-araCMP. In addition, araCMP and
T-araCMP phosphatase activities were not detected in the purified
preparation of dCK used in the current work. Therefore, these data
indicated that the discrepancy did not come from the difference in the
phosphatase activities in the crude extracts or the backward reaction
of the dCK. Although the reason for the discrepancy is still unclear, all the results in the current work favored the observation obtained using crude extracts from CEM cells.
Effects of araC, T-araC, and 5-Substituted Analogs of T-araC on
Wild-Type or dCK-Deficient CEM Cell Growth.
The
IC50 values of araC and T-araC against
dCK-deficient CEM cell growth were determined (Table
3). Wild-type CEM cells were slightly
less sensitive to T-araC than they were to araC. However, T-araC was
more potent against the dCK-deficient CEM cell growth than was araC.
dCK activity in this cell line was approximately 1% of that found in
wild-type cells. As part of our ongoing program to design and
synthesize new antitumor agents, several 5-substituted analogs of
T-araC (F-T-araC, Cl-T-araC, Br-T-araC, and
CH3-T-araC) were synthesized and evaluated for
biological activity. The Cl, Br, and CH3 analogs
were much less toxic (100- to 5000-fold) to wild-type CEM cells than
T-araC (Table 3). However, F-T-araC was about 10-fold more potent than
T-araC.
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Substrate Activities of 5-Substituted Analogs of T-araC for dCK
Phosphorylation.
To understand the structure-activity relationship
of 5-substituted analogs of T-araC for dCK activity, substrate
activities of T-araC, F-, Cl-, Br-, and
CH3-T-araC for dCK phosphorylation were examined
using UTP as the phosphate donor. T-araCMP and F-T-araCMP were detected
in dCK assays using Nucleosil SAX HPLC to separate nucleosides from
nucleotides (Fig. 3). As an estimation of
the Vmax value, the rate of
phosphorylation of F-T-araC at a saturating concentration (1 mM) using
UTP as the phosphate donor was determined by Nucleosil SAX HPLC and
compared with that of T-araC (Table 3). At this concentration, the
amount of product formed was similar for both compounds. Similar
results were obtained using ATP as the phosphate donor. To obtain an
estimate of the Km of F-T-araC, the
inhibition constant (Ki) of F-T-araC
against dCyd phosphorylation was determined (Fig.
4). The
Ki values of T-araC and F-T-araC were
551 ± 50 and 50 ± 9.4 using ATP as the phosphate donor, and 180 ± 25 and 27 ± 3.1 µM using UTP as the phosphate donor
(mean ± standard deviation, n = 3), respectively.
Based on these results, it was estimated that the
Km value of F-T-araC for dCK
phosphorylation using ATP or UTP as the phosphate donor was
approximately 8 or 3 µM, respectively. These results indicated that
the catalytic efficiency of dCK with F-T-araC was about 10-fold better
than that of T-araC.
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Discussion |
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We have previously discovered a structural analog of araC (T-araC)
that demonstrated excellent antitumor activity against a wide variety
of human solid tumor xenografts (Waud et al., 1999
; Tomkinson et al.,
2002
). As with many other nucleoside analogs used in the treatment of
cancer and viral infections, dCK is the rate-limiting step in its
activation to cytotoxic nucleotides (Parker et al., 2000
). Therefore,
we studied the phosphorylation of T-araC by dCK to increase our
understanding of the biochemical pharmacology of this new agent.
One of the more important findings of this work was the discovery of
the relative lack of importance of the phosphate donor to the
phosphorylation of T-araC by dCK, which revealed important insights
into the activation of this compound in human cells. The substitution
of ATP with UTP increased the catalytic efficiencies of both araC and
T-araC by about 3-fold, and thus, there was no change in the difference
in the catalytic efficiency between the two compounds. However, there
were significant differences in the degree of change in the
Km and
Vmax values between the two compounds
(for araC there was a 40-fold decrease in the
Km and 15-fold decrease in the
Vmax value when UTP was used in place of ATP, whereas there was only a 4-fold decrease in the
Km and little, if any, decrease in the
Vmax value for T-araC). These differences indicated that at low concentrations there is a 100-fold difference in the rate of phosphorylation between the two compounds, irrespective of whether ATP or UTP is used as the phosphate donor. However, at high concentrations only the kinetic parameters with UTP
can adequately predict the difference in the rate of phosphorylation between the two compounds in intact cells (Fig. 2). Since the peak
plasma concentration of T-araC at the optimal therapeutic dose of
T-araC (100 mg/kg) is 100 µM (Waud et al., 1999
; Parker et al.,
2000
), it is important to realize that the difference in the rate of
phosphorylation between the two compounds in tumor cells in animals
treated with these agents should be similar, not 100-fold as indicated
in our previous publication (Parker et al., 2000
).
Because the rate of metabolism of 100 µM T-araC was similar to that
of araC in intact cells and this result was predicted using the kinetic
parameters for araC and T-araC with UTP as the phosphate donor, these
results indicate that UTP is the primary phosphate donor in intact
cells when both UTP and ATP were present for this purpose. The
importance of UTP to dCK in intact cells was first suggested by White
and Capizzi (1991)
, who showed that the kinetics of araC
phosphorylation by intact cells was quantitatively similar to that seen
with purified dCK using UTP. In addition, only the deletion of UTP from
NTP mixtures in dCK assays significantly reduced the rate of
phosphorylation of dCyd and araC (White and Capizzi, 1991
; Shewach et
al., 1992
). Other results with purified enzymes have indicated that the
catalytic efficiencies of dCyd and several other nucleoside analogs
were greater using UTP as the phosphate donor rather than ATP, and that
UTP is preferred over ATP as a phosphate donor (Cheng et al., 1977
;
Shewach et al., 1992
; Krawiec et al., 1995
; Hughes et al., 1997
).
T-araC was more potent against dCK-deficient CEM cells than araC, which
is different from the result observed in wild-type CEM cells (Table 3).
It is clear from our results (Parker et al., 2000
) that dCK is
primarily responsible for the activation of both compounds in wild-type
cells. Therefore, the change in the relative potency of the two agents
in these two cell lines initially suggested to us that T-araC was
phosphorylated by another nucleoside kinase that did not recognize araC
as a substrate. However, this change in the relative potency of these
two agents can be explained by the differences observed in the kinetic
parameters of T-araC and araC using UTP as the phosphate donor. If one
assumed that ATP was the physiological phosphate donor, then araC would always be more potent than T-araC because the relative rates of phosphorylation would be similar at both low (nanomolar) and high (micromolar) concentrations of compounds. However, if UTP is the phosphate donor, then the rate of activation of T-araC would be similar
to that of araC at high concentrations but not at low concentrations.
Theoretically, there is only a 4-fold difference in the phosphorylation
of araC and T-araC at 15 µM when UTP is the phosphate donor. Our
previous results (Parker et al., 2000
) indicated that T-araCTP was
about 20-fold more potent than araCTP in inhibiting CEM cell growth.
Therefore, at concentrations leading to a similar rate of activation,
T-araC would be more cytotoxic than araC.
The characterization of the kinetic parameters with dCK of many
nucleoside analogs has been performed with ATP as the phosphate donor.
For comparison of catalytic efficiencies of nucleoside analogs, it may
not matter whether ATP or UTP was used as the phosphate donor because
the substitution of ATP with UTP usually decreases both
Km and
Vmax for dCK phosphorylation (White
and Capizzi, 1991
; Shewach et al., 1992
; Johansson and Karlsson, 1995
; Hughes et al., 1997
), and thus the difference in their catalytic efficiencies is only slightly changed. Our data, however, argue that
one could be misled by results obtained with ATP and that the use of
UTP to determine kinetic parameters of nucleoside analogs activated by
dCK is crucial for the comparison of their rates of phosphorylation and
prediction of their cytotoxicity in an in vivo setting.
Unlike dCyd and araC, which exhibit substrate inhibition when UTP is
used as the phosphate donor at concentrations above 1 to 3 and 10 to 20 µM, respectively (White and Capizzi, 1991
; Shewach et al., 1992
;
Hughes et al., 1997
), no substrate inhibition was observed with T-araC
at concentrations up to 1 mM (data not shown). In addition to the
relative lack of effect of phosphate donor on the kinetic parameters,
this observation also suggests that T-araC may be a unique cytosine
analog in terms of dCK phosphorylation. Substrate inhibition could
cause a problem for nucleosides with low
Km values with dCK. If a nucleoside
analog has a low Km value, one would
want to dose high enough to overcome the rate-limiting step of the
uptake process (Mackey et al., 1998
), but too much compound may result
in substrate inhibition. Therefore, to obtain the maximum triphosphate
formation, an ideal nucleoside analog should have a moderate
Km and a large
Vmax value for dCK phosphorylation.
In this study, we have also evaluated the cytotoxicity and
phosphorylation of numerous 5-substituted analogs of T-araC. Equivalent differences in cytotoxicity (10-fold) and catalytic efficiency for dCK
(10-fold) between T-araC and F-T-araC suggest that the enhanced
cytotoxicity of F-T-araC to cells in culture was related to its
enhanced substrate activity for dCK. However, it is possible that other
factors could also be involved in the enhanced potency of F-T-araC. Our
results with F-T-araC are consistent with previous studies with murine
dCK, which indicated that F-dCyd and F-araC were good substrates of
this enzyme (Cooper and Greer, 1973
; Balzarini and De Clercq, 1982
).
The Cl-, Br-, and CH3-substituted analogs of
T-araC were poorer substrates for human dCK, and likewise, did not have
significant effects on the growth of CEM cells. These results are
different from those of Br-, Cl-, and CH3-dCyd
obtained with calf thymus and mouse dCK (Cooper and Greer, 1973
;
Krenitsky et al., 1976
; Balzarini and De Clercq, 1982
). However, since
these data were obtained using ATP or TTP as the phosphate donor, the results might be different if UTP was used as the phosphate donor.
Unlike araC, T-araC demonstrates excellent activity against solid tumor
xenografts, which indicates that there must be actions of T-araC that
are different from those of araC and result in activity against solid
tumors. In the current study, we have fully characterized the
interaction of T-araC with dCK, the enzyme responsible for the
activation of both compounds. Although our previous results (Parker et
al., 2000
) indicated that there was 100-fold difference in the rate of
phosphorylation between araC and T-araC, the current study has revealed
that the actual difference is 2- to 3-fold at pharmacologically
relevant concentrations. However, since araC is still a better
substrate for dCK at any concentration, the difference in substrate
activity between these agents with dCK cannot explain why T-araC is a
superior agent against solid tumors. In our previous studies (Parker et
al., 2000
) we identified two biochemical differences between araC and
T-araC (greater potency of T-araCTP and longer intracellular
t1/2 of T-araCTP), which could help
compensate for the poor activation of T-araC by dCK. Because we now
know that T-araC is phosphorylated at pharmacological doses at a rate
that is similar to that of araC, these biochemical differences do not
just compensate for the poor activation of T-araC, but they enhance the
activity of T-araC beyond that of araC. It is hoped that increasing our
knowledge of the biochemical pharmacology of T-araC will lead to
identification of the activity or activities of this compound that
results in its excellent activity against solid tumors and that this
information would be useful in the design of new and better nucleoside
analogs. To further characterize the mechanism of action of T-araC,
studies are planned to examine the differences in the interaction of
the metabolites of araC and T-araC with enzymes involved in DNA replication.
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Footnotes |
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Accepted for publication December 6, 2002.
Received for publication October 9, 2002.
This work was supported by a grant from the National Cancer
Institute, P01 CA 34200. A preliminary report of this work was presented at the 2002 annual meeting of the American Association for
Cancer Research (Someya et al., 2002
).
DOI: 10.1124/jpet.102.045435
Address correspondence to: Dr. William B. Parker, Southern Research Institute, 2000 Ninth Avenue South, Birmingham, AL 35205. E-mail: parker{at}sri.org
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Abbreviations |
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T-araC, 4'-thio-
-D-arabinofuranosylcytosine;
araC,
-D-arabinofuranosylcytosine;
araCMP, 5'-monophosphate of
araC;
araCTP, 5'-triphosphate of araC;
Br-dCyd, 5-bromo-2'-deoxycytidine;
Br-T-araC, 5-bromo-4'-thio-
-D-arabinofuranosylcytosine;
CH3-dCyd, 5-methyl-2'-deoxycytidine;
CH3-T-araC, 5-methyl-4'-thio-
-D-arabinofuranosylcytosine;
Cl-dCyd, 5-chloro-2'-deoxycytidine;
Cl-T-araC, 5-chloro-4'-thio-
-D-arabinofuranosylcytosine;
dCK, deoxycytidine kinase;
dCyd, 2'-deoxycytidine;
dThd, thymidine;
F-araC, 5-fluoro-
-D-arabinofuranosylcytosine;
F-dCyd, 5-fluoro-2'-deoxycytidine;
F-T-araC, 5-fluoro-4'-thio-
-D-arabinofuranosylcytosine;
HPLC, high
pressure liquid chromatography;
MS, mass spectrometry;
SAX, strong
anion exchange;
T-araCMP, 5'-monophosphate of T-araC;
T-araCTP, 5'-triphosphate of T-araC;
T-dCyd, 4'-thio-2'-deoxycytidine.
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