Centro de Biología Molecular y Celular, Universidad Miguel
Hernández, Alicante, Spain (R.P.-C., A.M.F., C.G.M., A.F.-M.);
Laboratory of Neurobiology, Instituto de Investigaciones
Citológicas, Fundación Valenciana de
Investgaciones Biomédicas, Valencia, Spain (C.M.,
V.F.); Institut d'Investigacions Químiques i Ambientals de
Barcelona, Consejo Superior de Investigaciones Cientificas, Barcelona,
Spain (M.H., A.M.); Departamento de Bioquímica y
Biología Molecular, Universidad de Extremadura, Badajoz, Spain
(E.V., J.M.M.); and Departamento de Bioquímica y
Biología Molecular, Universidad de Valencia, Valencia, Spain
(E.P.-P.)
Excitotoxicity has been implicated in the etiology of ischemic stroke,
chronic neurodegenerative disorders, and very recently, in glioma
growth. Thus, the development of novel neuroprotectant molecules
that reduce excitotoxic brain damage is vigorously pursued. We have
used an ionic current block-based cellular assay to screen a synthetic
combinatorial library of trimers of N-alkylglycines on
the N-methyl-D-aspartate (NMDA) receptor, a
well known molecular target involved in excitotoxicity. We report the
identification of a family of N-alkylglycines that
selectively blocked the NMDA receptor. Notably, compound
3,3-diphenylpropyl-N-glycinamide (referred to as N20C)
inhibited NMDA receptor channel activity with micromolar affinity, fast
on-off blockade kinetics, and strong voltage dependence. Molecule N20C
did not act as a competitive glutamate or glycine antagonist. In
contrast, saturation of the blocker binding site with N20C prevented
dizolcipine (MK-801) blockade of the NMDA receptor, implying that both
drugs bind to the same receptor site. The N-alkylglycine
efficiently prevented in vitro excitotoxic neurodegeneration of
cerebellar and hippocampal neurons in culture. Attenuation of neuronal
glutamate/NMDA-induced Ca2+ overload and subsequent
modulation of the glutamate-nitric oxide-cGMP pathway seems to underlie
N20C neuroprotection. Noteworthy, this molecule exhibited significant
in vivo neuroprotectant activity against an acute, severe, excitotoxic
insult. Taken together, these findings indicate that
N-alkylglycine N20C is a novel, low molecular weight,
moderate-affinity NMDA receptor open channel blocker with in vitro and
in vivo neuroprotective activity, which, in due turn, may become a
tolerated drug for the treatment of neurodegenerative diseases and cancer.
 |
Introduction |
A
recognized hallmark of excitotoxic neuronal death seems to be
glutamate-mediated Ca2+ overload that, depending
on the free intracellular Ca2+ concentration and
the severity of the injury, leads to necrosis or apoptosis (Choi and
Rothman, 1990
; Lipton and Rosenberg, 1994
; Garthwaite, 1995
; Nicotera
et al., 1997
; Lee et al., 1999
). Glutamate neurotoxicity has been
implicated in the underlying neuronal damage found in cerebral
ischemia, as well as in the pathogenesis of different neurodegenerative
diseases, including amyotrophic lateral sclerosis and Huntington's,
Alzheimer's, and Parkinson's diseases (Lipton and Rosenberg, 1994
;
Garthwaite, 1995
; Chase et al., 2000
; Heinzt and Zoghbi, 2000
). Very
recently, excessive glutamate in the brain parenchyma has been
associated with brain tumor progression (Takano et al., 2001
). Among
the glutamate receptor family, the NMDA receptor plays a critical role
in excitotoxicity due to its remarkable Ca2+
permeability (Garthwaite, 1995
; Lee et al., 1999
). Indeed, a widely
held view is that prolonged activation of NMDA receptors mediates a
massive influx of Ca2+, leading to an imbalanced
cellular homeostasis that results in cell death (Schinder et al., 1996
;
Kroemer et al., 1998
; Lee et al., 1999
). As a consequence, NMDA
receptors have been considered prime therapeutic targets for the
development of useful neuroprotective strategies (Bräuner-Osborne
et al., 2000
). Accordingly, a significant effort has been made to
develop high-affinity and selective NMDA and glycine competitive
antagonists (Fischer et al., 1997
; Chenard and Menniti, 1999
;
Bräuner-Osborne et al., 2000
), as well as novel vaccine-based
strategies (During et al., 2000
). Although most of these molecules
efficiently reduce glutamate neurotoxicity in vitro, their in vivo
utility has been heavily questioned due to serious cognitive side
effects at clinically effective doses (Garthwaite, 1995
; Lee et al.,
1999
). The high receptor affinity of known NMDA receptor antagonists,
along with their lack of discrimination between pathologically and
physiologically acting receptors, seems to be a major shortcoming
because these compounds also suppress glutamate neurotransmission.
Because NMDA receptors are implicated in learning and memory,
inhibition of glutamate neurotransmission may underlie the cognitive
deficits provoked by high-affinity, competitive antagonists of these
receptors (Lipton and Rosenberg, 1994
; Lee et al., 1999
). Therefore,
there is a necessity to develop therapeutic strategies that target
overactivated receptors but do not arrest synaptic transmission.
Uncompetitive NMDA antagonists such as channel blockers are promising
leads for neuroprotectant drug discovery (Lipton and Rosenberg, 1994
;
Ferrer-Montiel et al., 1998a
; Parsons et al., 1999a
,b
; Le and
Lipton, 2001
; Tai et al., 2001
). A clear advantage of this kind of
compounds is that they bind preferentially to pathologically active
receptors. Drugs such as dizolcipine (MK-801) and phencyclidine are
nanomolar affinity open channel blockers that efficiently protect
neurons but display significant side effects. Submicromolar affinity
blockers such as memantine exhibit a better therapeutic profile,
although it has been reported that chronic administration of this
antagonist enhances neuronal death (Ikonomidou et al., 2000
). Thus, the
development of novel NMDA receptor open channel blockers of low
molecular weight, moderate-to-low receptor affinity, and fast on/off
blockade kinetics is actively pursued. These new compounds may be
devoid of the adverse in vivo effects of well established,
high-affinity NMDA antagonists (Parsons et al., 1999b
; Le and Lipton,
2001
).
We have used a channel blockade-based cellular assay to identify NMDA
receptor blockers from a combinatorial library of oligo N-substituted glycines, also known as peptoids
(García-Martínez et al., 2002
). We report the
identification of a family of N-alkylglycines that
selectively block the NMDA receptor channel activity with micromolar
activity in a voltage-dependent manner. Stepwise size reduction of the
original trimers of N-alkylglycines led to the identification of compound 3,3-diphenylpropyl-N-glycinamide
(N20C), a low molecular weight molecule that acts as an open channel
blocker. The N-alkylglycine N20C exhibited important
neuroprotection in vitro and in vivo. Because this neuroprotectant
molecule blocks the NMDA receptor with moderate affinity and fast
on/offset kinetics, it may minimize the psychotropic effects displayed
by high-affinity antagonists of this ionotropic receptor.
 |
Materials and Methods |
Synthesis of N-Trialkylglycine-Based Combinatorial
Mixtures and Individual Compounds.
The library and individual
oligo N-alkylglycines were prepared by simultaneous multiple
solid phase synthesis as described previously
(García-Martínez et al., 2002
). Briefly, the mixture positions (Fig. 1, X) were incorporated
by coupling a mixture of 22 selected amines with the relative ratios
adjusted to yield equimolar incorporation. Briefly, starting from Rink
amide resin (0.7 mEq/g; Rapp Polymere, Tübingen, Germany)
the eight-step synthetic pathway involved the initial release of the
Fmoc protecting group. Thereafter, the successive steps of acylation
with chloroacetyl chloride followed by the corresponding amination of
the chloromethyl intermediate, using the selected individual amine
(Fig. 1, O) or the mixture of amines (Fig. 1, X) was conducted. The
final step involved the release of the library components from the
resin by treatment with a trifluoroacetic
acid/CH2Cl2/H2O
cocktail. Analytical reverse phase-high-performance liquid
chromatography, laser desorption time of flight mass
spectrometry, and NMR were used to determined the purity and identity
of the individual oligo N-alkylglycine compounds.

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Fig. 1.
Screening of an oligo N-substituted
glycine combinatorial library to identify NMDA receptor blockers. A,
NMDAR blockade profile of the 66 library mixtures. Each graph
represents the blocking activity for each of the three positions that
compose the library. The bars denote the activity of each mixture as a
function of the number of the defined amine used to generate the
chemical diversity. Library mixtures were assayed at 100 µg/ml.
Horizontal bar denotes the cutoff blocking activity (set to 50%).
Inset, generic formula of the N-trialkylglycine
combinatorial library, where R1, R2, and
R3 denote the sites where chemical diversity was
introduced. B, representative blockade activity exerted by 100 µM of
selected N-trialkylglycines. Responses were normalized
with respect to that in the absence of peptoids. C, kinetics of channel
blocking activity of 100 µM N-trialkylglycine
N20-19-7C. Downward deflection denotes inward current. NMDA receptor
responses were elicited with 100 µM L-glutamate/10 µM
glycine (referred to as L-Glu), at a holding potential of
80 mV. Results are given as mean ± S.E.M. for at least three
oocytes.
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Synthesis and Characterization of N20C.
A solution of
3,3-diphenylpropylamine (0.25 g, 1.2 mmol) in anhydrous dioxane was
treated with chlorbetamide (0.11 g, 1.2 mmol) and
K2CO3 (0.33 g, 2.4 mmol)
for 24 h at 90°C. The crude reaction mixture was cooled down,
filtered, and washed with ethyl acetate. The joined organic fractions
were evaporated to dryness to give a residue, which was purified by
column chromatography on silica gel eluting with 200:10:5 ethyl
acetate/MeOH/NH4OH to give a pale yellow oil,
which solidified on standing. Recrystallization from
hexane/CH2Cl2 afforded pure
N20C in 60% yield. Compound N20C had the following properties:
melting point, 103°C; IR (KBr),
:
3000 to 3400 (NH), 1683 (CO) cm
1;
1H NMR (CDCl3),
: 7.1 to
7.3 (10H), 6.9 (NH), 66 (NH), 3.97 (t, 1H, J = 7.8 Hz),
3.11 (s, 2H), 2.51 (t, 2H, J = 6.8 Hz), 2.20 (t, 2H,
J = 6.8 Hz); 13C NMR
(CDCl3)
: 175.1 (CO), 144.2 (Ar), 128.3 (Ar),
127.4 (Ar), 126.0 (Ar), 52.04 (C-2), 48.61 (CH), 48.14 (CH2-NH), 35.51 (CH2-CH); GC-MS (e.i.),
m/z: 269 (M + 1), 224 (M
45), 165, 91.
Recombinant Rat NMDAR Channel Expression in
Xenopus Oocytes and Channel Blockade.
All the
procedures have been described in detail previously (Ferrer-Montiel et
al., 1998b
; Ferrer-Montiel and Montal, 1999
). Heteromeric NMDARs
composed of rat NR1 and NR2A subunits were used. Whole-cell currents
from NMDAR-injected oocytes were recorded in
Ba2+-Ringer solution (115 mM NaCl, 2.8 mM KCl,
1.8 mM BaCl2, and 10 mM HEPES, pH 7.4) with a
two-microelectrode voltage-clamp amplifier at 20°C. NMDAR channels
were activated by application of 100 µM L-glutamate/10
µM glycine (L-Glu) in the absence or presence of increasing concentrations of peptoid mixtures or individual compounds at a holding potential (Vh) of
80 mV.
Dose-response curves for individual peptoids were fitted to a Hill
equation:
where IC50 denotes the channel blocker
concentration that inhibits half of the response obtained in its
absence (Imax), and nH denotes the Hill coefficient, which
is an estimate of the number of drug binding sites. I-V characteristics
were recorded using a ramp protocol (Ferrer-Montiel et al., 1998b
;
Ferrer-Montiel and Montal, 1999
). Oocytes were depolarized from
80 to
20 mV in 5 s (20 mV/s). Leak currents were measured in the absence
of agonist in the external bath medium and subtracted from the ionic current recorded in the presence of the ligand. Voltage dependence of
channel blockade was studied as described previously (Ferrer-Montiel et
al., 1998b
). Experimental data were fitted to either the Hill or
Woodhull equations with a nonlinear least-squares regression algorithm
using MicroCal ORIGIN version 5.0 (MicroCal Software, Amherst, MA).
Hippocampal Cultures and Excitotoxic Death of Hippocampal Neurons
in Culture.
Mixed hippocampal neuronal/glial cultures were
prepared as described previously (Schinder et al., 1996
; Ferrer-Montiel
et al., 1998a
). Briefly, hippocampi from E17 to E19 rat embryos were incubated at 37°C in basic saline solution (BSS) containing 137 mM
NaCl, 3.5 mM KCl, 0.4 mM
KH2PO4, 0.33 mM
Na2HPO4 · 7H2O, 5 mM TES pH 7.4, and 10 mM glucose with
0.25% trypsin for 15 min. Trypsin was diluted by rinsing the tissue
3 × 5 min with BSS. Tissue was dissociated by several passes
through a siliconized Pasteur pipette. Cells were subjected to
centrifugation (5 min at 200g) and pellets resuspended in
BSS. Cells were plated (1 × 105 viable
cells/cm2) in minimal essential medium (Earle's
salts) supplemented with 10% heat-inactivated horse serum (Hyclone
Laboratories, Logan, UT), 10% fetal bovine serum (Hyclone
Laboratories), 1 mM glutamine, and 22 mM glucose. Cells were maintained
as described previously (Ferrer-Montiel et al., 1998a
).
Neurons cultured 15 to 17 days in vitro were used. Culture medium was
removed and neurons rinsed with BSS, 1 mM CaCl2,
and 10 µM glycine (control conditions). Cultures were challenged with 200 µM NMDA in the absence and presence of drugs or peptoids for 20 min at 22°C at the indicated concentrations. The excitotoxic insult
was terminated by removal of BSS medium, followed by addition of
culture medium supplemented with 20 µM MK-801 or peptoids to prevent
activation of NMDA receptor attributable to residual NMDA or glutamate
released from synapses. Cultures were returned to the incubator and
cell death was blindly assessed 18 to 24 h postinsult using the
trypan blue exclusion assay. The fraction of dead cells in cultures
treated with vehicle was subtracted. Neuroprotective activity is
expressed as the percentage of net neuronal survival with respect to
that elicited by the NMDA insult alone. A minimum of 500 cells was
counted on each culture dish. Three cultures were used for each experiment.
Cerebellar Cell Cultures and Glutamatergic Cell Death.
Primary cultures of cerebellar neurons were prepared using cerebella
from 7- to 8-day-old Wistar rats. Neurons were grown at 37°C in 5%
CO2 atmosphere (Miñana et al., 1998
). To
prevent proliferation of non-neuronal cells, 10 µM cytosine
arabinoside was added 24 h after plating. Glucose, 5.6 mM final,
was added to the culture medium twice a week.
Glutamate toxicity in cerebellar neurons was assayed after 11 to 15 days of culture. Briefly, culture medium was removed and kept at 37°C
(conditioned medium). Cells were washed with Locke's solution (154 mM
NaCl, 5.6 mM KCl, 3.6 mM NaHCO3, 2.3 mM
CaCl2, 5.6 mM glucose, and 5 mM HEPES pH 7.4) and
incubated with 10 µM glycine for 20 min at 37°C. Upon glycine
removal, neuronal cultures were incubated with 1 mM
L-glutamate in the absence or presence of peptoids or drugs
for 4 h at 37°C. Cells were washed with Locke's solution and
the conditioned medium was added back. Cell viability was measured
24 h later, by staining with fluorescein diacetate and propidium
iodide (Molecular Probes, Eugene, OR) as described previously (Marcaida
et al., 1995
). The percentage of surviving neurons was calculated by
assessing the ratio of fluorescein diacetate/propidium iodide
(green/red) staining directly under the microscope. At least 1200 cells
were counted for each point.
Determination of cGMP in Cultured Cerebellar Neurons.
Cerebellar neurons were used 11 to 15 days after seeding. To measure
NMDA-induced cGMP formation, neuronal cultures were washed three times
with prewarmed Locke's solution, and challenged with 1 mM NMDA for 5 min at 37°C, and cGMP levels were determined using the BIOTRAK cGMP
enzyme immunoassay kit (Amersham Biosciences AB, Uppsala, Sweden) as
described previously (Hermenegildo et al., 1998
; Montoliu et al.,
1999
). For each experiment, samples were measured in duplicate,
deviations within samples in the same experiment was always less than
10% of the mean value.
Determination of Free Intracellular Calcium.
Changes in
intracellular free Ca2+ were monitored in single
cerebellar neurons using an ACAS 570 confocal laser cytometer
(Meridians Instruments, Okemos, MI) (Marcaida et al., 1995
). Primary
cultures of cerebellar neurons were prepared as described above using
35-mm-diameter tissue culture dishes. Cells were loaded with 20 pM
Fluo-3/AM for 1 h at 37°C. Dye-loaded neurons were incubated
with peptoids for 10 min, and Ca2+ influx was
triggered with 250 pM NMDA. Each experiment was repeated at least four
times using three different neuronal cultures.
Prevention of Ammonia-Induced Excitotoxicity in Mice.
Acute
ammonia intoxication leads to excessive activation of NMDA receptors in
brain (Marcaida et al., 1995
; Hermenegildo et al., 1998
), which
is responsible for ammonia-induced excitotoxic lethality (Hermenegildo
et al., 1996
). Male Swiss mice (25-35 g) were injected i.p. with 14 mmol/kg (3 µl/g) ammonium acetate. To assess the protective effect of
peptoids, these were injected i.p. 10 min before ammonium injection.
The population of animals surviving the acute excitotoxic insult was
assessed 24 h postinsult.
 |
Results |
Screening of an N-Trialkylglycine-Based
Combinatorial Library to Identify Novel NMDAR Channel Blockers.
We
previously identified that arginine-rich hexapeptides block NMDA
receptors with high efficacy and, in addition, exhibit remarkable
neuroprotectant activity in vitro (Ferrer-Montiel et al., 1998a
). When
in vivo assayed in animal models of neurodegeneration, these peptides
exhibited high toxicity at therapeutically relevant doses (data not
shown). To circumvent this shortcoming a focused, mixture-based
combinatorial library made of trimers of N-alkylglycines in
a positional scanning format was designed and synthesized to identify
nontoxic blockers of the NMDA receptor channel activity (Fig. 1A, top,
inset). The library consisted of three separate positions each having a
single position defined with one of the 22 primary amines used (a total
of 66 separate mixtures), and the remaining two positions had an
equimolar mixture of these amines (García-Martínez et
al., 2002
). Each mixture contained 484 molecules, and the library
chemical diversity comprised 10,648 individual trimers. The set of 22 amines included aliphatic and aromatic groups to improve the
bioavailability and permeation through the blood-brain barrier of the
active N-trialkylglycines. We also considered using primary
amines bearing an additional tertiary amino group because of the
positive charge preference exhibited by the NMDA receptor
(Ferrer-Montiel et al., 1998a
).
Peptoid mixtures were assayed for blockade activity of recombinant rat
brain NMDAR channels composed of the rat NR1 and NR2A subunits
heterologously expressed in amphibian oocytes. Screening of the
complete library identified several mixtures that blocked
50% of the
L-glutamate-evoked ionic current (Fig. 1A). The preferred chemical functionalities at the R1 position were
2-[2-(N-methyl)pyrrolidinyl]ethyl and
3,3-diphenylpropylamine; at the R2 position were
3-(N,N-diethylamino)propyl and 3,3-diphenylpropylamine; and
at the R3 position were
2-(methylcarbonylamino)ethyl, 2-(2-pyridyl)ethyl, 3-(imidazolyl)ethyl,
3,3-diphenylpropyl, and 3-(N,N-dimethylamino)propyl.
When used in concert, the data derived from the screening suggest the
chemical identity of the bioactive N-trialkylglycines in the
library (Ferrer-Montiel et al., 1998a
; García-Martínez et al., 2002
). Thus, a family of individual
N-trialkylglycines, resulting from all possible combinations
of the active functional groups identified in the deconvolution
process, was synthesized. The extent of NMDA blockade activity of
representative members of the N-trialkylglycine family is
illustrated in Fig. 1B. Three compounds
[(3,3-diphenylpropyl)glycyl]-[[3-(N,N-diethylamino)propyl]glycyl]-[2-(methylcar- bonylamino) ethyl]glycinamide, [(3,3-diphenylpropyl)
glycyl]-[(3,3-diphenylpropyl)glycyl]-[2-(methylcarbonylamino)ethyl] glycinamide, and
[(3,3-diphenylpropyl)glycyl]-[[3-(N,N-diethylamino) propyl]glycyl]-[3-(imidazolyl)ethyl]glycinamide
(referred to as N20-19-7C, N20-20-7C, and N20-19-12C, respectively)]
inhibited NMDAR channel activity by
85% at 100 µM (Fig. 1B). As
displayed in Fig. 1C, NMDAR blockade by these compounds seems to be
rapid and readily washable, exhibiting fast
kon and
koff kinetic constants of channel
blockade. Note that active N-trialkylglycines have a
3,3-diphenylpropylamine group (amine no. 20) at the N-end position, implying that this chemical functionality is essential for function.
To further characterize the blockade activity of these molecules, we
selected the N-trialkylglycines N20--19-7C and N20-20-7C. The dose response of both compounds shows that N20-19-7C inhibited the
NMDA receptor channel activity with an IC50 of
24 ± 3 µM, whereas N20-20-7C had an IC50
of 22 ± 2 µM (Fig. 2). The hill coefficients for N20-19-7C and N20-20-7C were 0.9 ± 0.1 (n = 6) and 1.1 ± 0.3 (n = 4),
respectively. These results indicate a low blockade efficacy and the
presence of a single binding site for both
N-trialkylglycines. Analysis of current-to-voltage
relationships of receptor blockade by these molecules revealed a weak
voltage dependence (data not shown), suggesting that these molecules do not reach deep into the pore electrostatic field to reach their binding
site.

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Fig. 2.
Efficacy of identified
N-trialkylglycines blocking NMDA receptor channel
activity. Dose-response curves for compounds' N20-19-7C and N20-20-7C
blockade activity of glutamate-activated NMDA receptor channels
expressed in amphibian oocytes. Responses were normalized with respect
to that in the absence of N-trialkylglycines. Solid
lines depict the theoretical fits to a Michaelis-Menten binding
isotherm. Each point represents the mean ± S.E.M., with
n 4.
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An N-Alkylglycine Derived from Identified
N-Trialkylglycines Inhibits NMDA Receptor Responses with
Higher Efficacy and Selectivity.
Because the
3,3-diphenylpropylamine group seems to play a central role in function,
we reasoned that a reduction in the size of these newly identified
channel blockers may provide molecules with improved blockade efficacy.
Thus, we synthesized and investigated the inhibitory activity of the
N-dialkylglycines N20-19C and N20-20C, and the
N-alkylglycine N20C (Fig. 3).
Both N-dialkylglycines N20-19C and N20-20C were chemically
unstable, giving rise to the corresponding 1,4-diketopiperazines, which
did not significantly block the NMDA receptor (20 ± 5%,
n = 3) at concentrations as high as 50 µM (data not
shown). In contrast, the N-alkylglycine N20C was chemically stable, and inhibited the NMDA receptor with moderate micromolar efficacy. As illustrated in Fig. 4A,
agonist-elicited ionic currents from oocytes heterologously expressing
the NMDA receptor were rapidly reduced by
80% when challenged with
50 µM of N20C. Channel unblocked was fast, as evidenced by the full
recovery of agonist-operated responses after blocker removal (Fig. 4A).
The dose-response relationship of N20C inhibitory activity is shown in
Fig. 4B. The IC50 of receptor inhibition was
5.0 ± 0.2 µM (n = 5), which is ~4-fold lower
than that exhibited by N-trialkylglycines. The hill
coefficient was 0.8 ± 0.1, suggesting the presence of a single
binding site.

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Fig. 3.
Representative chemical structures of
N-trialkylglycines selected and characterized in this
study. Chemical structures were drawn with ChemDraw software package.
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Fig. 4.
N-Alkylglycine N20C is an efficient
and selective blocker of the NMDA receptor. A, representative blockade
of the NMDA receptor elicited by 25 µM N-alkylglycine
N20C. Solid lines depict pulse length. Downward defection denotes
inward currents. B, dose-response curve for compound N20C blockade
activity of glutamate-activated recombinant NMDA receptor channels.
Responses were normalized with respect to that in the absence of
N-alkylglycine. Solid lines depict the theoretical fits
to a Michaelis-Menten binding isotherm. Each point represents the
mean ± S.E.M. with n 4. C, blockade
activity of 100 µM N-alkylglycine N20-19-7C and 50 µM N20C on the heteromeric NMDA receptor, the non-NMDA receptor
GluR1, and the vanilloid receptor VR1. NMDA receptors were activated
with 100 µM L-glutamate/10 µM glycine, GluR1 receptors
with 200 µM kainate, and VR1 receptors with 10 µM capsaicin. Ionic
currents were elicited at 80 mV and normalized with respect to that
obtained in the absence of blockers.
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We next examined the receptor selectivity of these molecules. As
illustrated in Fig. 4C, 100 µM N20-19-7C inhibited 87 ± 5% (n = 10) of the NMDAR channel activity, 9 ± 2%
(n = 3) of the homomeric rat brain GluR1, and 25 ± 4% (n = 4) of the capsaicin-activated receptor VR1
from rat dorsal root ganglion. Notably, 50 µM
N-alkylglycine N20C reduced the NMDA receptor activity by
92 ± 4% (n = 10), the GluR1-mediated ionic
currents by 5 ± 2% (n = 4), and VR1 responses by
7 ± 2% (n = 4). In addition, compound N20C did
not block recombinant, voltage-dependent Ca2+
channels nor Na+ channels nor
K+ channels (data not shown). Taken together,
these findings suggest that newly identified
N-alkylglycines, especially N20C, selectively block the NMDA receptor.
N-Alkylglycine N20C Is a Noncompetitive Antagonist
That Binds to Receptor Permeation Pathway.
To characterize the
inhibitory activity of this compound, we studied the mechanism of
channel blockade. Because N20C is a glycine derivative, we first
questioned whether the N-alkylglycine acted as a competitive
glycine antagonist. As depicted in Fig. 5A, the glycine-dependent activation of
the NMDA receptor exhibited an EC50 of 0.8 ± 0.1 µM (n = 5) that was not significantly changed by the presence of 20 µM N20C in the medium
(EC50 = 1.1 ± 0.3 µM, n = 5). These data imply that the N-alkylglycine N20C does not
recognize the glycine binding site. Similarly, this compound did not
act as a competitive L-glutamate antagonist (data
not shown). Accordingly, N20C seems to be a noncompetitive NMDA
antagonist.

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Fig. 5.
N-Alkylglycine N20C is a
noncompetitive antagonist that senses the pore electrostatic field. A,
dose-response relationship for glycine-dependent activation of
recombinant NMDA receptor in the absence ( N20C) and presence (+N20C)
of 20 µM N20C. L-Glutamate concentration was 100 µM,
and holding potential was 80 mV. B, voltage dependence of NMDA
receptor block by N-alkylglycine N20C. Current-voltage
relationship obtained with agonist in the absence (bottom trace) and
presence (top trace) of 5 µM N20C. Reversal potential of ionic
currents was 7 ± 3 mV. Inset, fraction of unblocked response
(I/Imax) as a function of the
membrane potential. Solid line depicts the best fit to a Woodhull-type
model considering a single site and negligible multiple ion occupancy
of this site. The estimated electrical distance was ~ 0.55.
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Compound N20C has a secondary amine group with a
pKa of 7.8, indicating that at neutral
pH there is a population of positively charged molecules that could be
sensing the pore electrostatic field. To evaluate whether the
N-alkylglycine is a channel blocker, we studied the voltage
dependence of channel blockade. Current-to-voltage relationships depict
that molecule N20C inhibited glutamate/glycine-operated responses
exclusively at negative membrane potentials in the range of
80 to
40 mV (Fig. 5B). The reversal potential of the ionic currents was not
altered by the compound (Fig. 5B, Vr =
7 ± 3 mV). These results indicate that NMDA receptor blockade by N20C is
voltage-dependent, and suggest that the N-alkylglycine
binding site senses the pore electrostatic field. To further
substantiate this observation, we obtained the fraction of unblocked
response (Iblocker/Icontrol)
as a function of the membrane potential (Fig. 5B, inset). The fraction
of unblocked response-voltage relationship is related with the location
of the blocker binding site within the membrane electrostatic field
(Woodhull, 1973
; Hille, 1992
; Zarei and Dani, 1995
; Premkumar
and Auerbach, 1996
). Experimental data exhibited a dependence on the
applied membrane voltage in the range of
80 to
45 mV, consistent
with a rather internal location of the drug binding site. Indeed,
considering the occurrence of a single binding site within the pore
electrostatic field and a negligible multiple ion occupancy of this
site (Woodhull, 1973
; Hille, 1992
; Zarei and Dani, 1995
), the inferred
electrical distance of the N20C binding site from the mouth of the
channel,
, was ~0.55 (Fig. 5B, inset). In agreement with this
observation, saturation of the superficial cation binding site
(
0.10; Premkumar and Auerbach, 1996
; Ferrer-Montiel et al.,
1998a
) with 10 mM extracellular Ba2+ did not
alter the percentage of NMDA receptor inhibition by 10 µM N20C
[62 ± 4% at 2 mM
[Ba2+]o
(n = 4) versus 58 ± 5% at 10 mM
[Ba2+]o
(n = 4)]. Together, these results imply that the drug
binding site is located within the aqueous pore, and hint that N20C
acts as an NMDAR open channel blocker with moderate affinity.
To further investigate the mechanism of channel blockade by compound
N20C, we evaluated whether it prevented MK-801 blockade of the NMDA
receptor. The rational of the experiment was based on the remarkably
slow dissociation of MK-801 bound to the receptor at negative
potentials (Huettner and Bean, 1988
; Ferrer-Montiel et al., 1998a
). As
illustrated in Fig. 6, blocking activity
of 500 µM N20C was readily washable (75 ± 5% response
recovery, n = 5), whereas that of MK-801 was virtually
irreversible (10 ± 3% response recovery, n = 3).
Saturation of the N20C binding site with 500 µM
N-alkylglycine notably prevented MK-801 interaction with the
receptor as evidenced by the nearly complete recovery of the
glutamate-evoked ionic current upon blocker removal (75 ± 4%
response recovery) (Fig. 6B). This finding suggests that both channel
blockers compete for the same binding site, thus implying that compound
N20C binds deep into the channel permeation pathway.

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Fig. 6.
Compound N20C prevents MK-801 binding to recombinant
NMDA receptors. Sequentially perfused oocytes with agonist pulses in
the absence and the presence of 500 µM N-alkylglycine
N20C plus 1 µM MK-801 (A), followed by pulses of agonist alone. Pulse
duration is indicated by solid lines. B, extent of channel blockade
(solid columns) and recovery (stripped column) for compound N20C,
MK-801, and N20C in combination with MK-801. Concentrations were as
indicated in the sequential pulse protocol illustrated in A. L-Glutamate-evoked currents, at 80 mV, were normalized
with respect to that obtained without blocker (first pulse in the
protocol). Glu#1 and Glu#2 are the two sequential agonist pulses after
blocker(s) application. Rundown current was 15%. Values are
indicated as mean ± S.E.M., with n 3.
|
|
Identified N-Alkylglycines Have Significant in Vitro
Neuroprotectant Activity.
NMDA receptor open channel blockers with
low-to-moderate blockade efficacy are considered promising therapeutic
leads to reduce the devastating effects of excitotoxic neuronal death
(Parsons et al., 1999a
). We subsequently assessed whether
compound N20C displayed neuroprotectant activity. For these
experiments, we evaluated the extent of protection exerted by N20C on
primary cultures of cerebellar neurons exposed to 1 mM
L-glutamate for 4 h. This insult gave rise to
considerable neural death (
80%) that was significantly attenuated by
the presence of N20C in the extracellular medium (Fig.
7A). The dose-response relationship shows
that N20C-mediated neuroprotectant activity increased as a function of
the drug concentration, until a maximal 85 ± 6% (n = 4) neuronal survival at 30 µM (Fig. 7B). Higher
concentrations of the N-alkylglycine were toxic to the
neuronal cultures. Similar neuroprotection efficacy of 20 µM N20C was
obtained when assayed on hippocampal neurons exposed to 200 pM NMDA for
20 min (Fig. 7A). The N-trialkylglycines N20-19-7C and
N20-20-7C were also neuroprotectants against these excitotoxic insults,
although they exhibited lower neuroprotective efficacy, as evidenced by
the higher peptoid concentrations required (Fig. 7A). The level of neuroprotectant activity exhibited by these new compounds was comparable with that exerted by 10 µM MK-801.

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Fig. 7.
Identified N-alkylglycines protect
primary neuronal cultures from an excitotoxic insult. Normalized
neuronal survival induced by L-glutamate (cerebellar
neurons) or NMDA (hippocampal neurons) in the presence of blockers.
Cerebellar primary neuronal cultures were challenged with 1 mM
L-glutamate for 4 h. Hippocampal primary neurons were
exposed to 200 µM NMDA for 20 min. Neuronal survival was evaluated
24 h after insult and normalized with respect to that obtained in
the absence of channel blockers. MK-801 was assayed at 10 µM, N20C at
20 µM, and N20-19-7C and N20-20-7C at 100 µM. B, dose-response
relationship of in vitro neuroprotectant activity of
N-alkylglycine N20C. Neuronal survival was evaluated at
increasing concentrations of compound N20C. Two conditions were used:
L-Glu, where no agonist or coagonist was used; and
+L-Glu, where cultures were exposed to 1 mM
L-glutamate for 4 h. Values are given as mean ± S.E.M., with n 1500. Each condition was tested
on a minimum of three different cultures.
|
|
Neuroprotection by N-alkylglycine N20C correlated well with
inhibition of NMDA-induced cGMP formation that results from
Ca2+ influx through the receptor (Fig.
8A). In agreement with this finding,
compound N20C significantly reduced the
L-glutamate-induced intracellular
Ca2+ increase in cerebellar neurons at
concentrations that show significant neuroprotection (Fig. 8B). Thus,
the N-alkylglycine N20C arrests L-glutamate-induced neuronal death by blocking
the NMDA receptor channel activity, preventing neuronal
Ca2+ overload, and subsequent nitric oxide and
cGMP formation.

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Fig. 8.
Down-regulation of the glutamate-nitric oxide-cGMP
pathway underlies N20C neuroprotection. A, inhibition of NMDA-induced
cGMP formation by increasing concentrations of compound N20C cGMP
formation was measured in cerebellar neurons as described under
Materials and Methods. Data were normalized with respect
to that of basal conditions. Data are given as mean ± S.E.M. with
n 4. B, blockade of NMDA-induced
Ca2+ entry into cerebellar neurons as a function of the
N-alkylglycine concentration. Neurons were loaded with
Fluo-3, incubated with N20C for 10 min, and Ca2+ influx was
triggered with 250 µM NMDA. Values are mean ± S.E.M., with
n 4.
|
|
Identified N-Alkylglycine Exhibit in Vivo
Neuroprotectant Activity.
To determine the potential in vivo
antineurodegenerative activity of the identified
N-alkylglycine N20C, we next investigated whether this
compound prevented the excitotoxic death characteristic of an animal
model of hepatic encephalopathy, a neurological disorder caused by high
levels of ammonia (Hermenegildo et al., 1998
). Intraperitoneal
administration of ammonium acetate provokes a hyperammonemic condition
that triggers an acute, lethal, excitotoxic insult in mice brain.
Hyperammonemia excitotoxicity is completely and specifically prevented
by antagonists of the NMDA receptor, implying that activation of this
ionotropic receptor significantly contributes to this form of severe
neurodegeneration (Hermenegildo et al., 1996
). Thus, this model of
acute and intense excitotoxicity represents a reliable and reproducible
assay to assess the in vivo neuroprotectant activity of newly developed
molecules. As depicted in Fig. 9,
intraperitoneal injection of N20C, before the acute excitotoxic insult,
prevented ammonia excitotoxicity in a dose-dependent manner, as
evidenced by the increasing population of unaffected mice. The minimum
dose that produced a protective effect was 5 µg/g, and the maximal
protection against the excitotoxic insult was obtained at 50 µg/g.
Overall, the in vivo neuroprotective efficacy of N20C was higher than
that depicted by parenteral N-trialkylglycines N20-19-7C and
N20-20-7C that required doses as high as 200 µg/g to protect animals
against hyperammonemia excitotoxicity (data not shown). Taken together,
these findings suggest that newly identified N-alkylglycine
N20C exhibits significant in vivo neuroprotectant activity.

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Fig. 9.
N-Alkylglycine N20C exhibits
remarkable in vivo neuroprotectant activity. Dose-response relationship
of the protection exerted by compound N20C against the severity of
ammonia excitotoxicity. N-Alkylglycine N20C was injected
intraperitoneally 10 min before ammonium injection. Ammonium acetate
(14 mmol/kg) was also injected intraperitoneally. Stock solutions were
adjusted to reach the desired dose by injecting 3 µl/g of body
weight. The number of surviving mice was counted 24 h after the
acute excitotoxic insult. The number of mice used in each condition was
eight.
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 |
Discussion |
Glutamate antagonists have been shown to exhibit important
neuroprotectant activity in vitro against excitotoxic insults that kill
neurons, as well as in experimental models of stroke, head trauma, and
tumor growth (Lee et al., 1999
; Ikonomidou et al., 2000
; Rzeski et al.,
2001
; Takano et al., 2001
). The NMDA subtype of glutamate receptors is
considered a central player in glutamate neurotoxicity because of its
large Ca2+ permeability (Lee et al., 1999
).
Indeed, prolonged activation of this receptor overloads neurons with
Ca2+ prompting necrotic cell death, although a
contribution of apoptosis has not been ruled completely out
(Garthwaite, 1995
; Lee et al., 1999
; Ikonomidou et al., 2000
).
Accordingly, NMDA receptor-specific blockers may be useful compounds to
reduce excitotoxic neurodegeneration. Because of their preferential
interaction with active receptors, uncompetitive NMDA antagonists are
considered promising neuroprotectants to ameliorate the devastating
effects of neurodegeneration. Particular emphasis is being directed
toward uncompetitive NMDA antagonists acting as open channel blockers
with moderate-to-low efficacy, rapid blockade kinetics, and reduced
blocker trapping when the channel closes upon the ligand is removed
(Huettner and Bean, 1988
; Blanpied et al., 1997
; Parsons et al.,
1999a
). Compared with high-affinity blockers such as MK-801,
these drugs cause few channels to accumulate in the trapped state. As a
consequence, the population of channels blocked during synaptic
activity would release the drug rather than trap it, thus resetting
synapses for incoming activity. In contrast, overstimulated receptors
by high and/or persistent levels of L-glutamate will be
effectively tuned down by these types of drugs.
We have screened a restricted, oligo N-substituted,
glycine-based combinatorial library to find novel antagonists of the
NMDA receptor. Oligomers of N-substituted glycines provide a
class of small, non-natural molecules that are proteolytically stable and have potent biological activities (Ostergaard and Holm, 1997
; Heizmann et al., 1999
). A major advantage of using short oligomers is
that low molecular mass molecules (
600 Da) usually display acceptable
tissue penetration properties and better pharmacological conformities (Ostergaard and Holm, 1997
; Newton, 1999
;
Pardridge, 1999
; Lipinski et al., 2001
). To identify channel blockers,
the inhibitory activity of peptoid mixtures was evaluated at saturating concentrations of L-glutamate and glycine and a
negative holding potential (Ferrer-Montiel et al., 1998b
). The
salient contribution of this work is the identification of a family of
trimers of N-alkylglycines bearing a 3,3-diphenylpropylamino
moiety that blocked the NMDA receptor channel activity.
Structure-activity relationship studies on the trimers selected from
the library deconvolution led to a stepwise size reduction strategy
that resulted in the identification of the low molecular mass
N-alkylglycine N20C (268.2). This compound selectively inhibited NMDA channel activity with micromolar affinity, fast on/offset kinetics, modest trapping, and strong voltage dependence (
~0.55). Compound N20C did not compete with
L-glutamate nor glycine. In contrast, saturating
concentrations of this molecule completely prevented MK-801 blockade of
the NMDA receptor. This observation, along with the finding that the
N20C binding site is located deep into the pore electrostatic field,
indicates that the N-alkylglycine interacts with the channel
permeation pathway. Consequently, the N-alkylglycine N20C
can be considered a novel open channel blocker of the NMDA receptor.
With the exception of memantine, which has shown promising results for
the treatment of Alzheimer's dementia and Parkinson, the majority of
channel blockers of the NMDA receptor has failed in clinical trials
(Chen et al., 1998
; Lee et al., 1999
; Parsons et al., 1999b
; Le and
Lipton, 2001
). Thus, there is an urgency for developing novel
neuroprotectant molecules that target the NMDA receptor. Recently, an
N-benzylated triamine was described as a highly selective
and potent NMDA receptor blocker with in vitro neuroprotectant
activity, although an in vivo activity was not demonstrated (Tai et
al., 2001
). The N-alkylglycine N20C also exhibited
significant in vitro neuroprotection, as evidenced by the prevention of
glutamate-induced neuronal death of primary neuronal cultures from
hippocampus and cerebellum. The in vitro neuroprotective potency
rivaled with that shown by MK-801 and memantine (Table
1). Prevention of neuronal death
correlated with attenuation of sustained Ca2+
influx through NMDA receptors, as well as subsequent activation of
downstream signaling cascades such as glutamate-nitric oxide-cGMP pathway. More significantly, the neuroprotectant activity of compound N20C was also seen in vivo in an experimental animal model of acute,
severe excitotoxicity such as hepatic encephalopathy. Administration of
50 µg/g N20C protected
70% mice from acute hyperammonemia excitotoxicity, a condition triggered by massive and sustained activation of the NMDA receptor (Hermenegildo et al., 1996
, 1998
). This
finding suggests that the N-alkylglycine N20C readily
crosses the blood-brain-barrier to reach the brain, consistent with its moderate hydrophobicity (log P = 2.04) (Lipinski et al., 2001
). Notably, the extent of in vivo neuroprotection of N20C is significantly higher than that characteristic of memantine (Table 1), which suggests
a better therapeutic profile for the N-alkylglycine. It is
also remarkable to note that compound N20C did not exhibit toxicity at
concentrations as high as 100 µg/g, and that animals treated with the
N-alkylglycine did not display conspicuous behavioral or
motor deficits. However, further work is required to determine the
therapeutic index of this new neuroprotectant. Taken together, the in
vitro and in vivo beneficial properties of compound N20C emphasize its
therapeutic potential for clinical use in the treatment of
neurodegenerative diseases that have an excitotoxic component as well
as in glioma growth. In conclusion, this novel open channel blocker of
the NMDA receptor should be considered a lead compound for drug
development.
We are indebted to S. Nakanishi for providing rat NR1 and NR2A
subunits cDNA, D. Julius for rat VR1 channel cDNA, and P. Seeburg for
rat GluR1 cDNA. We thank R. Torres for technical assistance with cRNA
preparation, oocyte manipulation, and injection, and C. Carreño,
Wim van der Nest, M. Delgado, and J. Messeguer for the preparation of
N-alkylglycine samples.
Accepted for publication February 19, 2002.
Received for publication January 16, 2002.
This work was supported by grants from La Fundación La
Caixa (to A.F.-M.), Fundació La Marató de TV3 (to A.M. and
V.F.), the Spanish Interministerial Commission of Science (Centro de Investigación Científica y Tecnológica) and
Technology and the European Commission (to A.F.-M. and E.P.-P.), and
the Centro de Investigación Científica y
Tecnológica (to A.F.-M. and A.M.).